Phylogenetic tree produced from next generation sequencing data of Shigella surveillance samples from Belgium 2013-2019
Shigella_subtree_2.RdOutputs of analysis with next generation sequencing data of Shigella surveillance samples from Belgium 2013-2019
Source
This data was posted on the European Nucleotide Archive
The original dataset is Shigella_subtree_2.txt
This is version 1.0.
This dataset is English.
This dataset is licensed under CC by-NC-SA 4.0
Details
This is based on sequencing data from routine surveillance samples collected in Belgium between 2013 and 2019. It was produced using used together with sample_data_Shigella_tree and Shigella_tree
References
Fischer, N. et al. Genomic epidemiology of persistently circulating MDR Shigella sonnei strains associated with men who have sex with men (MSM) in Belgium (2013-19) doi:10.1093/jac/dkab377